Lines Matching refs:scaffIndex
288 int *scaffIndex; member
4429 if (dtd->scaffIndex) { in doProlog()
4430 int *temp = (int *)REALLOC(dtd->scaffIndex, in doProlog()
4434 dtd->scaffIndex = temp; in doProlog()
4448 dtd->scaffIndex[dtd->scaffLevel] = myindex; in doProlog()
4467 && (dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type in doProlog()
4470 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type in doProlog()
4595 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type in doProlog()
4655 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel]].quant = quant; in doProlog()
5664 p->scaffIndex = NULL; in dtdCreate()
5704 ms->free_fcn(p->scaffIndex); in dtdReset()
5705 p->scaffIndex = NULL; in dtdReset()
5741 ms->free_fcn(p->scaffIndex); in dtdDestroy()
5877 newDtd->scaffIndex = oldDtd->scaffIndex; in dtdCopy()
6280 if (!dtd->scaffIndex) { in nextScaffoldPart()
6281 dtd->scaffIndex = (int *)MALLOC(groupSize * sizeof(int)); in nextScaffoldPart()
6282 if (!dtd->scaffIndex) in nextScaffoldPart()
6284 dtd->scaffIndex[0] = 0; in nextScaffoldPart()
6308 CONTENT_SCAFFOLD *parent = &dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel-1]]; in nextScaffoldPart()