288   int *scaffIndex;  member
4442           if (dtd->scaffIndex) {  in doProlog()
4443             int *temp = (int *)REALLOC(dtd->scaffIndex,  in doProlog()
4447             dtd->scaffIndex = temp;  in doProlog()
4461         dtd->scaffIndex[dtd->scaffLevel] = myindex;  in doProlog()
4480           && (dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type  in doProlog()
4483         dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type  in doProlog()
4608         dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type  in doProlog()
4668         dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel]].quant = quant;  in doProlog()
5680   p->scaffIndex = NULL;  in dtdCreate()
5720   ms->free_fcn(p->scaffIndex);  in dtdReset()
5721   p->scaffIndex = NULL;  in dtdReset()
5757     ms->free_fcn(p->scaffIndex);  in dtdDestroy()
5893   newDtd->scaffIndex = oldDtd->scaffIndex;  in dtdCopy()
6305   if (!dtd->scaffIndex) {  in nextScaffoldPart()
6306     dtd->scaffIndex = (int *)MALLOC(groupSize * sizeof(int));  in nextScaffoldPart()
6307     if (!dtd->scaffIndex)  in nextScaffoldPart()
6309     dtd->scaffIndex[0] = 0;  in nextScaffoldPart()
6333     CONTENT_SCAFFOLD *parent = &dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel-1]];  in nextScaffoldPart()