1 /*
2  * Licensed to the Apache Software Foundation (ASF) under one or more
3  * contributor license agreements.  See the NOTICE file distributed with
4  * this work for additional information regarding copyright ownership.
5  * The ASF licenses this file to You under the Apache License, Version 2.0
6  * (the "License"); you may not use this file except in compliance with
7  * the License.  You may obtain a copy of the License at
8  *
9  *      http://www.apache.org/licenses/LICENSE-2.0
10  *
11  * Unless required by applicable law or agreed to in writing, software
12  * distributed under the License is distributed on an "AS IS" BASIS,
13  * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14  * See the License for the specific language governing permissions and
15  * limitations under the License.
16  */
17 package org.apache.commons.math.stat;
18 
19 import java.io.Serializable;
20 import java.text.NumberFormat;
21 import java.util.Iterator;
22 import java.util.Comparator;
23 import java.util.TreeMap;
24 
25 import org.apache.commons.math.MathRuntimeException;
26 import org.apache.commons.math.exception.util.LocalizedFormats;
27 
28 /**
29  * Maintains a frequency distribution.
30  * <p>
31  * Accepts int, long, char or Comparable values.  New values added must be
32  * comparable to those that have been added, otherwise the add method will
33  * throw an IllegalArgumentException.</p>
34  * <p>
35  * Integer values (int, long, Integer, Long) are not distinguished by type --
36  * i.e. <code>addValue(Long.valueOf(2)), addValue(2), addValue(2l)</code> all have
37  * the same effect (similarly for arguments to <code>getCount,</code> etc.).</p>
38  * <p>
39  * char values are converted by <code>addValue</code> to Character instances.
40  * As such, these values are not comparable to integral values, so attempts
41  * to combine integral types with chars in a frequency distribution will fail.
42  * </p>
43  * <p>
44  * The values are ordered using the default (natural order), unless a
45  * <code>Comparator</code> is supplied in the constructor.</p>
46  *
47  * @version $Revision: 1054186 $ $Date: 2011-01-01 03:28:46 +0100 (sam. 01 janv. 2011) $
48  */
49 public class Frequency implements Serializable {
50 
51     /** Serializable version identifier */
52     private static final long serialVersionUID = -3845586908418844111L;
53 
54     /** underlying collection */
55     private final TreeMap<Comparable<?>, Long> freqTable;
56 
57     /**
58      * Default constructor.
59      */
Frequency()60     public Frequency() {
61         freqTable = new TreeMap<Comparable<?>, Long>();
62     }
63 
64     /**
65      * Constructor allowing values Comparator to be specified.
66      *
67      * @param comparator Comparator used to order values
68      */
69     @SuppressWarnings("unchecked") // TODO is the cast OK?
Frequency(Comparator<?> comparator)70     public Frequency(Comparator<?> comparator) {
71         freqTable = new TreeMap<Comparable<?>, Long>((Comparator<? super Comparable<?>>) comparator);
72     }
73 
74     /**
75      * Return a string representation of this frequency
76      * distribution.
77      *
78      * @return a string representation.
79      */
80     @Override
toString()81     public String toString() {
82         NumberFormat nf = NumberFormat.getPercentInstance();
83         StringBuilder outBuffer = new StringBuilder();
84         outBuffer.append("Value \t Freq. \t Pct. \t Cum Pct. \n");
85         Iterator<Comparable<?>> iter = freqTable.keySet().iterator();
86         while (iter.hasNext()) {
87             Comparable<?> value = iter.next();
88             outBuffer.append(value);
89             outBuffer.append('\t');
90             outBuffer.append(getCount(value));
91             outBuffer.append('\t');
92             outBuffer.append(nf.format(getPct(value)));
93             outBuffer.append('\t');
94             outBuffer.append(nf.format(getCumPct(value)));
95             outBuffer.append('\n');
96         }
97         return outBuffer.toString();
98     }
99 
100     /**
101      * Adds 1 to the frequency count for v.
102      * <p>
103      * If other objects have already been added to this Frequency, v must
104      * be comparable to those that have already been added.
105      * </p>
106      *
107      * @param v the value to add.
108      * @throws IllegalArgumentException if <code>v</code> is not Comparable,
109      *         or is not comparable with previous entries
110      * @deprecated use {@link #addValue(Comparable)} instead
111      */
112     @Deprecated
addValue(Object v)113     public void addValue(Object v) {
114         if (v instanceof Comparable<?>){
115             addValue((Comparable<?>) v);
116         } else {
117             throw MathRuntimeException.createIllegalArgumentException(
118                   LocalizedFormats.CLASS_DOESNT_IMPLEMENT_COMPARABLE,
119                   v.getClass().getName());
120         }
121     }
122 
123     /**
124      * Adds 1 to the frequency count for v.
125      * <p>
126      * If other objects have already been added to this Frequency, v must
127      * be comparable to those that have already been added.
128      * </p>
129      *
130      * @param v the value to add.
131      * @throws IllegalArgumentException if <code>v</code> is not comparable with previous entries
132      */
addValue(Comparable<?> v)133     public void addValue(Comparable<?> v){
134         Comparable<?> obj = v;
135         if (v instanceof Integer) {
136            obj = Long.valueOf(((Integer) v).longValue());
137         }
138         try {
139             Long count = freqTable.get(obj);
140             if (count == null) {
141                 freqTable.put(obj, Long.valueOf(1));
142             } else {
143                 freqTable.put(obj, Long.valueOf(count.longValue() + 1));
144             }
145         } catch (ClassCastException ex) {
146             //TreeMap will throw ClassCastException if v is not comparable
147             throw MathRuntimeException.createIllegalArgumentException(
148                   LocalizedFormats.INSTANCES_NOT_COMPARABLE_TO_EXISTING_VALUES,
149                   v.getClass().getName());
150         }
151     }
152 
153     /**
154      * Adds 1 to the frequency count for v.
155      *
156      * @param v the value to add.
157      */
addValue(int v)158     public void addValue(int v) {
159         addValue(Long.valueOf(v));
160     }
161 
162     /**
163      * Adds 1 to the frequency count for v.
164      *
165      * @param v the value to add.
166      * @deprecated to be removed in math 3.0
167      */
168     @Deprecated
addValue(Integer v)169     public void addValue(Integer v) {
170         addValue(Long.valueOf(v.longValue()));
171     }
172 
173     /**
174      * Adds 1 to the frequency count for v.
175      *
176      * @param v the value to add.
177      */
addValue(long v)178     public void addValue(long v) {
179         addValue(Long.valueOf(v));
180     }
181 
182     /**
183      * Adds 1 to the frequency count for v.
184      *
185      * @param v the value to add.
186      */
addValue(char v)187     public void addValue(char v) {
188         addValue(Character.valueOf(v));
189     }
190 
191     /** Clears the frequency table */
clear()192     public void clear() {
193         freqTable.clear();
194     }
195 
196     /**
197      * Returns an Iterator over the set of values that have been added.
198      * <p>
199      * If added values are integral (i.e., integers, longs, Integers, or Longs),
200      * they are converted to Longs when they are added, so the objects returned
201      * by the Iterator will in this case be Longs.</p>
202      *
203      * @return values Iterator
204      */
valuesIterator()205     public Iterator<Comparable<?>> valuesIterator() {
206         return freqTable.keySet().iterator();
207     }
208 
209     //-------------------------------------------------------------------------
210 
211     /**
212      * Returns the sum of all frequencies.
213      *
214      * @return the total frequency count.
215      */
getSumFreq()216     public long getSumFreq() {
217         long result = 0;
218         Iterator<Long> iterator = freqTable.values().iterator();
219         while (iterator.hasNext())  {
220             result += iterator.next().longValue();
221         }
222         return result;
223     }
224 
225     /**
226      * Returns the number of values = v.
227      * Returns 0 if the value is not comparable.
228      *
229      * @param v the value to lookup.
230      * @return the frequency of v.
231      * @deprecated replaced by {@link #getCount(Comparable)} as of 2.0
232      */
233     @Deprecated
getCount(Object v)234     public long getCount(Object v) {
235         return getCount((Comparable<?>) v);
236     }
237 
238     /**
239      * Returns the number of values = v.
240      * Returns 0 if the value is not comparable.
241      *
242      * @param v the value to lookup.
243      * @return the frequency of v.
244      */
getCount(Comparable<?> v)245     public long getCount(Comparable<?> v) {
246         if (v instanceof Integer) {
247             return getCount(((Integer) v).longValue());
248         }
249         long result = 0;
250         try {
251             Long count =  freqTable.get(v);
252             if (count != null) {
253                 result = count.longValue();
254             }
255         } catch (ClassCastException ex) {
256             // ignore and return 0 -- ClassCastException will be thrown if value is not comparable
257         }
258         return result;
259     }
260 
261     /**
262      * Returns the number of values = v.
263      *
264      * @param v the value to lookup.
265      * @return the frequency of v.
266      */
getCount(int v)267     public long getCount(int v) {
268         return getCount(Long.valueOf(v));
269     }
270 
271     /**
272      * Returns the number of values = v.
273      *
274      * @param v the value to lookup.
275      * @return the frequency of v.
276      */
getCount(long v)277     public long getCount(long v) {
278         return getCount(Long.valueOf(v));
279     }
280 
281     /**
282      * Returns the number of values = v.
283      *
284      * @param v the value to lookup.
285      * @return the frequency of v.
286      */
getCount(char v)287     public long getCount(char v) {
288         return getCount(Character.valueOf(v));
289     }
290 
291     /**
292      * Returns the number of values in the frequency table.
293      *
294      * @return the number of unique values that have been added to the frequency table.
295      * @see #valuesIterator()
296      */
getUniqueCount()297     public int getUniqueCount(){
298         return freqTable.keySet().size();
299     }
300 
301     //-------------------------------------------------------------
302 
303     /**
304       * Returns the percentage of values that are equal to v
305      * (as a proportion between 0 and 1).
306      * <p>
307      * Returns <code>Double.NaN</code> if no values have been added.</p>
308      *
309      * @param v the value to lookup
310      * @return the proportion of values equal to v
311      * @deprecated replaced by {@link #getPct(Comparable)} as of 2.0
312      */
313     @Deprecated
getPct(Object v)314     public double getPct(Object v) {
315         return getPct((Comparable<?>) v);
316     }
317 
318     /**
319      * Returns the percentage of values that are equal to v
320      * (as a proportion between 0 and 1).
321      * <p>
322      * Returns <code>Double.NaN</code> if no values have been added.</p>
323      *
324      * @param v the value to lookup
325      * @return the proportion of values equal to v
326      */
getPct(Comparable<?> v)327     public double getPct(Comparable<?> v) {
328         final long sumFreq = getSumFreq();
329         if (sumFreq == 0) {
330             return Double.NaN;
331         }
332         return (double) getCount(v) / (double) sumFreq;
333     }
334 
335     /**
336      * Returns the percentage of values that are equal to v
337      * (as a proportion between 0 and 1).
338      *
339      * @param v the value to lookup
340      * @return the proportion of values equal to v
341      */
getPct(int v)342     public double getPct(int v) {
343         return getPct(Long.valueOf(v));
344     }
345 
346     /**
347      * Returns the percentage of values that are equal to v
348      * (as a proportion between 0 and 1).
349      *
350      * @param v the value to lookup
351      * @return the proportion of values equal to v
352      */
getPct(long v)353     public double getPct(long v) {
354         return getPct(Long.valueOf(v));
355     }
356 
357     /**
358      * Returns the percentage of values that are equal to v
359      * (as a proportion between 0 and 1).
360      *
361      * @param v the value to lookup
362      * @return the proportion of values equal to v
363      */
getPct(char v)364     public double getPct(char v) {
365         return getPct(Character.valueOf(v));
366     }
367 
368     //-----------------------------------------------------------------------------------------
369 
370     /**
371      * Returns the cumulative frequency of values less than or equal to v.
372      * <p>
373      * Returns 0 if v is not comparable to the values set.</p>
374      *
375      * @param v the value to lookup.
376      * @return the proportion of values equal to v
377      * @deprecated replaced by {@link #getCumFreq(Comparable)} as of 2.0
378      */
379     @Deprecated
getCumFreq(Object v)380     public long getCumFreq(Object v) {
381         return getCumFreq((Comparable<?>) v);
382     }
383 
384     /**
385      * Returns the cumulative frequency of values less than or equal to v.
386      * <p>
387      * Returns 0 if v is not comparable to the values set.</p>
388      *
389      * @param v the value to lookup.
390      * @return the proportion of values equal to v
391      */
getCumFreq(Comparable<?> v)392     public long getCumFreq(Comparable<?> v) {
393         if (getSumFreq() == 0) {
394             return 0;
395         }
396         if (v instanceof Integer) {
397             return getCumFreq(((Integer) v).longValue());
398         }
399         @SuppressWarnings("unchecked") // OK, freqTable is Comparable<?>
400         Comparator<Comparable<?>> c = (Comparator<Comparable<?>>) freqTable.comparator();
401         if (c == null) {
402             c = new NaturalComparator();
403         }
404         long result = 0;
405 
406         try {
407             Long value = freqTable.get(v);
408             if (value != null) {
409                 result = value.longValue();
410             }
411         } catch (ClassCastException ex) {
412             return result;   // v is not comparable
413         }
414 
415         if (c.compare(v, freqTable.firstKey()) < 0) {
416             return 0;  // v is comparable, but less than first value
417         }
418 
419         if (c.compare(v, freqTable.lastKey()) >= 0) {
420             return getSumFreq();    // v is comparable, but greater than the last value
421         }
422 
423         Iterator<Comparable<?>> values = valuesIterator();
424         while (values.hasNext()) {
425             Comparable<?> nextValue = values.next();
426             if (c.compare(v, nextValue) > 0) {
427                 result += getCount(nextValue);
428             } else {
429                 return result;
430             }
431         }
432         return result;
433     }
434 
435      /**
436      * Returns the cumulative frequency of values less than or equal to v.
437      * <p>
438      * Returns 0 if v is not comparable to the values set.</p>
439      *
440      * @param v the value to lookup
441      * @return the proportion of values equal to v
442      */
getCumFreq(int v)443     public long getCumFreq(int v) {
444         return getCumFreq(Long.valueOf(v));
445     }
446 
447      /**
448      * Returns the cumulative frequency of values less than or equal to v.
449      * <p>
450      * Returns 0 if v is not comparable to the values set.</p>
451      *
452      * @param v the value to lookup
453      * @return the proportion of values equal to v
454      */
getCumFreq(long v)455     public long getCumFreq(long v) {
456         return getCumFreq(Long.valueOf(v));
457     }
458 
459     /**
460      * Returns the cumulative frequency of values less than or equal to v.
461      * <p>
462      * Returns 0 if v is not comparable to the values set.</p>
463      *
464      * @param v the value to lookup
465      * @return the proportion of values equal to v
466      */
getCumFreq(char v)467     public long getCumFreq(char v) {
468         return getCumFreq(Character.valueOf(v));
469     }
470 
471     //----------------------------------------------------------------------------------------------
472 
473     /**
474      * Returns the cumulative percentage of values less than or equal to v
475      * (as a proportion between 0 and 1).
476      * <p>
477      * Returns <code>Double.NaN</code> if no values have been added.
478      * Returns 0 if at least one value has been added, but v is not comparable
479      * to the values set.</p>
480      *
481      * @param v the value to lookup
482      * @return the proportion of values less than or equal to v
483      * @deprecated replaced by {@link #getCumPct(Comparable)} as of 2.0
484      */
485     @Deprecated
getCumPct(Object v)486     public double getCumPct(Object v) {
487         return getCumPct((Comparable<?>) v);
488 
489     }
490 
491     /**
492      * Returns the cumulative percentage of values less than or equal to v
493      * (as a proportion between 0 and 1).
494      * <p>
495      * Returns <code>Double.NaN</code> if no values have been added.
496      * Returns 0 if at least one value has been added, but v is not comparable
497      * to the values set.</p>
498      *
499      * @param v the value to lookup
500      * @return the proportion of values less than or equal to v
501      */
getCumPct(Comparable<?> v)502     public double getCumPct(Comparable<?> v) {
503         final long sumFreq = getSumFreq();
504         if (sumFreq == 0) {
505             return Double.NaN;
506         }
507         return (double) getCumFreq(v) / (double) sumFreq;
508     }
509 
510     /**
511      * Returns the cumulative percentage of values less than or equal to v
512      * (as a proportion between 0 and 1).
513      * <p>
514      * Returns 0 if v is not comparable to the values set.</p>
515      *
516      * @param v the value to lookup
517      * @return the proportion of values less than or equal to v
518      */
getCumPct(int v)519     public double getCumPct(int v) {
520         return getCumPct(Long.valueOf(v));
521     }
522 
523     /**
524      * Returns the cumulative percentage of values less than or equal to v
525      * (as a proportion between 0 and 1).
526      * <p>
527      * Returns 0 if v is not comparable to the values set.</p>
528      *
529      * @param v the value to lookup
530      * @return the proportion of values less than or equal to v
531      */
getCumPct(long v)532     public double getCumPct(long v) {
533         return getCumPct(Long.valueOf(v));
534     }
535 
536     /**
537      * Returns the cumulative percentage of values less than or equal to v
538      * (as a proportion between 0 and 1).
539      * <p>
540      * Returns 0 if v is not comparable to the values set.</p>
541      *
542      * @param v the value to lookup
543      * @return the proportion of values less than or equal to v
544      */
getCumPct(char v)545     public double getCumPct(char v) {
546         return getCumPct(Character.valueOf(v));
547     }
548 
549     /**
550      * A Comparator that compares comparable objects using the
551      * natural order.  Copied from Commons Collections ComparableComparator.
552      */
553     private static class NaturalComparator<T extends Comparable<T>> implements Comparator<Comparable<T>>, Serializable {
554 
555         /** Serializable version identifier */
556         private static final long serialVersionUID = -3852193713161395148L;
557 
558         /**
559          * Compare the two {@link Comparable Comparable} arguments.
560          * This method is equivalent to:
561          * <pre>(({@link Comparable Comparable})o1).{@link Comparable#compareTo compareTo}(o2)</pre>
562          *
563          * @param  o1 the first object
564          * @param  o2 the second object
565          * @return  result of comparison
566          * @throws NullPointerException when <i>o1</i> is <code>null</code>,
567          *         or when <code>((Comparable)o1).compareTo(o2)</code> does
568          * @throws ClassCastException when <i>o1</i> is not a {@link Comparable Comparable},
569          *         or when <code>((Comparable)o1).compareTo(o2)</code> does
570          */
571         @SuppressWarnings("unchecked") // cast to (T) may throw ClassCastException, see Javadoc
compare(Comparable<T> o1, Comparable<T> o2)572         public int compare(Comparable<T> o1, Comparable<T> o2) {
573             return o1.compareTo((T) o2);
574         }
575     }
576 
577     /** {@inheritDoc} */
578     @Override
hashCode()579     public int hashCode() {
580         final int prime = 31;
581         int result = 1;
582         result = prime * result +
583                  ((freqTable == null) ? 0 : freqTable.hashCode());
584         return result;
585     }
586 
587     /** {@inheritDoc} */
588     @Override
equals(Object obj)589     public boolean equals(Object obj) {
590         if (this == obj)
591             return true;
592         if (!(obj instanceof Frequency))
593             return false;
594         Frequency other = (Frequency) obj;
595         if (freqTable == null) {
596             if (other.freqTable != null)
597                 return false;
598         } else if (!freqTable.equals(other.freqTable))
599             return false;
600         return true;
601     }
602 
603 }
604