Lines Matching refs:scaffIndex
296 int *scaffIndex; member
4481 if (dtd->scaffIndex) { in doProlog()
4482 int *temp = (int *)REALLOC(dtd->scaffIndex, in doProlog()
4486 dtd->scaffIndex = temp; in doProlog()
4500 dtd->scaffIndex[dtd->scaffLevel] = myindex; in doProlog()
4519 && (dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type in doProlog()
4522 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type in doProlog()
4647 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type in doProlog()
4707 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel]].quant = quant; in doProlog()
5719 p->scaffIndex = NULL; in dtdCreate()
5759 ms->free_fcn(p->scaffIndex); in dtdReset()
5760 p->scaffIndex = NULL; in dtdReset()
5796 ms->free_fcn(p->scaffIndex); in dtdDestroy()
5932 newDtd->scaffIndex = oldDtd->scaffIndex; in dtdCopy()
6344 if (!dtd->scaffIndex) { in nextScaffoldPart()
6345 dtd->scaffIndex = (int *)MALLOC(groupSize * sizeof(int)); in nextScaffoldPart()
6346 if (!dtd->scaffIndex) in nextScaffoldPart()
6348 dtd->scaffIndex[0] = 0; in nextScaffoldPart()
6372 CONTENT_SCAFFOLD *parent = &dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel-1]]; in nextScaffoldPart()